I have identical problems with very good condition Program Plus and 50mm f/1.7. It's detailed in this thread here
https://www.pentaxforums.com/forums/pentax-slr-lens-discussion/34313-my-progr...-infinity.html
Unfortunately I haven't another Pentax body or lens to compare with. I suppose my focusing screen is misadjusted and my focus is slightly off at all ranges. However the camera takes fine pictures, and I have forgotten about it, until I read this thread again, which made my OCD flare up. I suppose I would have to shoot a bunch of resolution charts with it wide open or something to find out if the focus was really off in absolute terms. It's still interesting to hear of another Program Plus with this issue.